Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE----VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL
4O6V Chain:D ((11-239))----IQKVAIITAGGSGMGAASARRLAQDGFAVAILSSSGK-GEALAKELGGIGVTGSNQSNDDLQKLVDQTLEKWGRIDVLVNSAGHGPRAPILEITDEDWHKGMDTYFLNAVRPARLVVPAMQKQKSGVIINISTAWAF-EPSAMFPTSAVFRAGLASFTKIFADTYAAENIRMNNVLPGWIDSLPTTEERR-------------ESVPMQRYGKSEEIAATVSFLASDGAAYITGQNLRVDGGLT-


General information:
TITO was launched using:
RESULT:

Template: 4O6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1276 -72187 -56.57 -320.83
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain D : 0.74

3D Compatibility (PKB) : -56.57
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4O6V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4o6v-query.scw
PDB file : Tito_Scwrl_4O6V.pdb: