Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVEQNEFLSQVQLQILAEQAIKQYPSDYQGQVKLLCQSENATYQVSTGSARYALRIHRPNYHSKLDIQSELEWLDALNASGIQVPVAIADQSGERVITLKLSNDIYRYAVLFNWVEGD-MPTVEVDPTAFEQLGQITAKLHAHSKTWQAPENFQRIVWNHETMVGADGHWGNWKNAPHLRPQDHGVIEEAIAQISKDLNFFGKTQERYGLIHADLRLTNLLLQQ-ERIGVIDFDDCGMSWFMHDLAAAISFNEHYANAPHWVDYWLKGYERVGHIQSEEYEMIPTFIMQRRIQMMAWNGSHAQTEMAQSLGDQWSNETVRLCKKYLNGQMPVGI
4R78 Chain:A ((24-280))------------IIKEKISSLLSQE-EEV-LSVEQLGGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDI--------------EAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFA-PFEEIK---------KYESLIEE-QIPYANYESVRNAVFSLEKRLAD---LGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESE---FTSQEEETFLSHYESDQTPVSHE--KIAIYKILQDTIWSLWTVYKEE-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1192 -23323 -19.57 -91.46
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -19.57
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: