Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLTEANVLDYLTGRGFAGPEFVVRGEWTVRNLSRRNRNFRVTRGGREFLVKQAGTWDLPGRASI-EREADLCRRAATDPCFGALRPLVPDVYS--------YDPDHSILIFEFLPDEASLSDVPERLDARTARLAGELMADYHRQMQSAALAEHFPGSLP---GYFSMHRWDSER----LVTRSQGQRELVRLV-KRHAAFAPALESAAAEWRPGALIHGDWKLENCLISND-GARMHVVDWELAGWGDARWDVATLLQSWWKRWVRDPAE-YRLEAMRPELRALLNPSEDEVAAILRFAAVRMLQSAWESLQDIPAIHGEAVRMAQVSLNILTNPEWAGEAVFGHD
4OCV Chain:A ((42-296))-------------------------DSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQG------KETLDIVRTTSGDTWAEIDGGAWRVYKFIEH-TMSYNLV--PNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAA-GCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGF----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 927 -441 -0.48 -1.87
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -0.48
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.224

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: