Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNKMKNHKITKLGGLNNSNYLLECEN---------NKYVLRIPSKDNK--NNFSEENFVLIFANLNKLSPPIIYHNKDNGILISKFLEDSKVNMSTFTSLEFLEKLSINLRKLHILKCEH--IF-NPFEHIRKNFHILKSKNF-N---FHQ-------DIDLVL-NKLNILEEKLSKNMTIGLCHNDLNSSNVLYYN-------KNVLFIDFEFSAMCDIFFDLATVSW-M-LD------------------EKKRYFLIKSYFGYYS--------------Y-ELMEKLENYLFVVKLWNASWSFLKSLNT---NSTYDYKLGGNMIIDDLLSTL
5FUT Chain:A ((32-375))------FHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG----GAEAMVLESVMFAILAERSLGPKLYGIF--PQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLES---TPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQARFDAYFHQKRK-


General information:
TITO was launched using:
RESULT:

Template: 5FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 881 -28643 -32.51 -114.57
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -32.51
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_5FUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fut-query.scw
PDB file : Tito_Scwrl_5FUT.pdb: