Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEEFANRINLNTDLSNISKIICNKYNLGEYISDAVITVGYEDFNYTLETTQGKYCVKVFNKERTDIECEKYIERIELASKLNINTPKLYRVDEKSECNIKLENIKYRLCVFDYIDGK-SFYDLGKIPNQDEINEIIRQMAIIHKATLQSDFIYDKWA-IINFVKEFQNKKQYLNGNDYKKLEELYNRFL-QVDIEKLPKAFVHGDIISTNVMKDKNNKLWIIDFAVSNYVPRIIDLAVSSCNLCLDTENKENTKKKVKMILEEYQKYNKLTDYELEQFPLFFDIANAMGILQISHLNTLGELSEEDKFWYDESEKGLEFSNEEFWKDIYVKK
3DXQ Chain:B ((21-250))--------------------------------GPLERLGGLTNLVFRA----GDLCLRIP-------NRANEAVAAREAAKAGVS-PEVLHVDPA-----------TGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGY-HDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTG-ERMWIVDWEYSGMNDPLWDLGDLSVEGKFN-------ANQDEELMRAYFGGEA-RPAERGRVVIYKAMCD----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 987 -25575 -25.91 -116.78
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -25.91
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: