Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSRTKNLLSHEDIQRLVKVNFGEEYEHKIGEIKELKGGMFNAIYLIQRVDEKNGIVLKVGVAPGRDLLTYEQDIMPTEVACYQLIKEKTSIPIPEILKYDFSKKYIDSNYFFMEELKGV-PLSKASKLMNKPSLDKIKSKLAEYLVQLHKIEGNYFGYFTDEKKYQYDTWKNAFLSMFGQLLEDCKFHKVNIPYERIEQALKYNIQFLEE-IKKPSLVMFDCHEGNVFVNKRNGEYEIQGIIDFERAFWGDPAADFPAAFIMS-DDIRKEEAFLASYFEKSDTKKEYTRDDEIRFQMYRMYILTVMAGETFRYGPLYAKMQREWAKSGILKCLEILED
4R7B Chain:A ((21-300))---------MEKIIKEKISSLLSQEE--EVLSVEQL-GGMTNQNYLAKTTNK--QYIVKFFGKGTEK-----LINRQDEKYNLELLKD-LGLDVKNYLFDI------EAGIKVNEYIESAITLDST-------SIKTKFDKIAPILQTIHTSAKELRGEFA-----PFEEIKK-YESLIEEQIPY-------ANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQ---GRL-YLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQT------PVSHEKIAIYKILQDTIWSLWTVYKEEQGE-DFGDYGVNRYQRAVKGL--


General information:
TITO was launched using:
RESULT:

Template: 4R7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1330 -32725 -24.61 -118.14
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -24.61
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.331

(partial model without unconserved sides chains):
PDB file : Tito_4R7B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r7b-query.scw
PDB file : Tito_Scwrl_4R7B.pdb: