Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSYEFNVTQLRDLPFGDKNIKIITEKKGGWDSRFFILD----GKVAVKVPRNITVQHSIIKEKIVTDLLRKE-LPLPIPDMNLAEIDSIDGNKIIIVIYEMLPGIELQNIHII----------GENKIKTSKSLGLFLQKLHNIPDELAQILRSGISNVN--NERNETDLELLNSVLEYFEEMRNKTNVSSYIEIMRTSMGSLKQMGTKIVPCHGDFMSNNILYNEIEGKISGIIDWGDFSFRNPIYDFAGLTYEFGEEFLDSMLAAYASNT---SPDFREKIVKLSRFVPFITVYFSRHMKKKIRFEKKYIKIELLESGRNQILHVR
5UXA Chain:A ((2-302))-SKDIKQVIEIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIY--------TEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAV------RAKFG---VGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKD-ANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFALVSGIEEYEQMAKEALEVQGS---------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1224 -23722 -19.38 -84.42
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -19.38
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: