Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVENMGRDSMWQAISTLLRDWHTEDA------EIELKTELPGGEIHSAWHLRFG---------GKDYFVKCDEREL-LPIFTAESDQLELLSRSKTVRVPQVFAVGSDRDYSFVVMEYLPPRPLDA------HNAFLLGQQLAHLHQWSDQPQFGLDFDNDLSTTPQPNAWQRRWSVFFAEQRIGW-QLELAAEKG---LHFGDIDTLVDMVQQRLANHQPQPSLLHGDLWSGNCALGPDGPYIFD-PACYWGDRECDLAMLPMH----------------------PEQPPQIYDGYQSVSPLPSGFLDRQPIYQLYTLLNRAILFGGQHLVTAQQALDDVLMEKMR
1NW1 Chain:A ((53-359))----------KERAHMLCAR-FLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSER-HLG-PKLYGIFS----GGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKE-P--------DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPK-RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGN--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 907 -19641 -21.65 -86.14
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -21.65
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.263

(partial model without unconserved sides chains):
PDB file : Tito_1NW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1nw1-query.scw
PDB file : Tito_Scwrl_1NW1.pdb: