Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKPRFTLAEAKAMARDEFHVRVAAIVELN-SYDDQNYK--VTAENGAVYVLKVHNGVESRDEGLLDAQSQLYERLRRKGVA-APYPVDSNP--LADGDATFALRLLEWVDGDLLSSKEITPGLLATTGAFLGRIRLALDDFDHAALH----RVHLWDGRQFPALASFADGLVD----AG-------CDVDKAADVHRAIANFDAVVAPA-AAQLPLATLHGDFNDANVLVGA-ETLGVLDIGDSVHSWRVNDVAVGMAYVVV
3I1A Chain:B ((3-250))-KQPIQAQQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADS-ESKSYFIKLKYGY--H--D--EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREI----VRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGV--


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 731 -1071 -1.47 -4.76
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -1.47
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: