Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MSTRRPEIPADLRQWIAEMTGTDVVEVR-QVPGGASRQAWFVDAGTGARSRALFLRYDPREADP-GSAFHPLQVEAEIMAELHRHGVTVPQVIAAHPTLQAVLLERVGGDTWFRLIQDPDEQVRTARDFIGKLAALHRIDAQHLTIPSLGPAGPVAGHVRAEIAAMRARLSRYGKPAPLLAFCIDWLDRHVPDYDGPTVMVQGDTGPGNFMYSGGVVTAVVDWELAHFGDPMDDIAWLSLRTVQDTFTDFPARLAEYEQLSGHRIDD---DRVWYYRLFAE-TRLASISPGSIDTRASVPPASPDAGNSLIYGMLHRRLLVEALAHVVGIPEVDVELPPEGDADAPSEHSSVYEAAASAMSGAAARSTDA---LALRYVKGAARLVKY-LAEVDRIGAVVDAQETAELTAVLGWAPRSVSQGRAA-------------LAELAGRGDLTDRDYVTQLWRGIKHDDY-LTRTASGAL-ARRTWPPLRHPVPPPSVEQGDRDRWVSPSPKTTVS
4X8E Chain:A ((8-435))PHRAELARQLIDARNRTLRLVDFDDAELRRQYDPLMSPLVW--DLAHIGQQEELWL---LRGGDPRRPGLLEPAVEQLYDAFVHPRASRVHLPLL-SPAQARRFCATVRSAVLDALDRLPEDA--DTFAFGMVVSHEHQHDETMLQALNLRSGEPLLGS---------------GTALP----------PGRPGVAGTSVLVPG--GPFVLGVDLADEPYALDNE-----RPAHVVDVPAFRIGRVPVT--NAEWRAFIDDGGYRQRRWWSDAGWAYRCEAGLTAPQFWNPDGTRTR---------------------------FGHVEDIPP-----------DEPVQHVTYFEAEAYAAWAGARLPTEIEWEKACAWDPATGRRRRYPWGDAAPTAALANLGGDALRPAPVGAYPAGASACGAEQMLGDVWEWTSSPLRPWPGFTPMIYQRYSQPFFEGAGSGDYRVLRGGSWAVAADILRPSFRNWDHPIR-----RQIFAGVRLAWDVD


General information:
TITO was launched using:
RESULT:

Template: 4X8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2058 326 0.16 0.81
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 0.16
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_4X8E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4x8e-query.scw
PDB file : Tito_Scwrl_4X8E.pdb: