Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTKPLSILQPGTGLFNTHVTLEDVNKAIKEQMSTESELTAESKME--VIGEGNGFSSCVILITCHWTIPSSHLPKKLILKIVSFVHVQGLLNKSNEEGNSVMSPEEEAHVHAHFEKSCQKGHNLEVEFCEAFGHLEGLLLPKVFFSQKFEEDNPNKGFVGMEFVEGSVVRHCYE---------NVTV----DELQPILKALARLQALSLSTESCRNLDNGEAFEESLMDMLSEDGLKGIFDQSRNIDQKLSEKVERIEQNHKEILNLETVLNLNKV-VGIDQKVICHGDLWAANILWTQTDGGFIADKVLDYQESHMGNPAEDLVRLLVSTISGADRQ-----------SHWEHILEQFYTYFTDEIGSNNAPYTLEQLKTSFKLYFPVGALTLISLFGPAVDMKLQGMESGKAENYRRIVIEKVDCLLDDVLNFHDFNKKFTGKN
3ATT Chain:A ((4-297))------------------AVISRWLSSVLPGGA-----APE-VTVESGVDST--GMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPV---------------------FPTY-----RLDHQFEVIRLVGELTDVPVPRVRWIETTGD-VLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTF-SFLT----DTTLHRHFN--WVRSWYDFAVEG-IGRSPLLERT---FEWLQ-----SHWPDDAAA-REPVLLWGDARVGNVLYRDF----QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQAL------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ATT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1121 -51186 -45.66 -195.37
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -45.66
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.188

(partial model without unconserved sides chains):
PDB file : Tito_3ATT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3att-query.scw
PDB file : Tito_Scwrl_3ATT.pdb: