Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLGDNELTLTPI-PGKSGKAYMGSYPDGKRIFVKMNTSP-----------ILPGLARE---QI-APQLLWSRRLADGRDMCAQEWLTGKILTPY----------DMNRKQIVNILTRLHRSRPLMTQLSRLGYAMETPVDLLQSWQETAPDALR--KNHFISEVMADLRQTIPGFREDHATIVHGDVRHSNWIETDSG-LIYLVDWDSVRLTDRMFDVAHMLCHYI---SEHQWKEWLTYYGYKYNQTVLSKLYWYGQLSYLSQISKYYMNQDLENVNREIHGLRHFRDKYGKRR
5IQI Chain:C ((28-303))------VDSIEIIGSGYDSVAYLVN----NEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYIS-DELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYI-LLRETIYNDLTDIEKDYIESFMERLNATT--VFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTY------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1055 1787 1.69 7.32
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : 1.69
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.340

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: