Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSNNNNPLTRDEILSRYFPQYRPAVATSQGLSGGSCIIAHDTHRVVLRRHHDPDAPPAHFLRHYRALSQLPASLAPRALFYTPGWMAVEYLHGVVNSALPDAD--------ELAALLYHLHQQPRFGWRIALSPLLAQYWSCCDPARRTPFWLRRLKQLQKNGEPRPLRLAPLHMDVHGDNIVLTSAG----LRLIDWEYAGDGDIALELAAVWVEDERQHRQLADAYAARARIDARQLWRQIRLWHPWVIMLKAGWFE-YRWRQTGEQQFIRLADETWRQLRMKG---
4WW7 Chain:A ((4-257))---------EFIDKVSSYLT---PDVDIAPISQGAAIVFTTTTHPYLPRAKDSHQKYIIKYRPRTLNESRLLAKLYLIPGLCVPQLIACDPYNGFIWLEFLGEDLPGGHGFSNLKNFLWMHDQDPY-------SDLVATTLRKVGRQIGLLHWNDYC-----------------HGDLTSSNIVLVRDGARWTPHLIDF---GLGSV----------SNLVEDKGVDLYVLERAILSTHS-KHAEKYNAW---IMEGFEEVYREQGAKGAKKLKEVTKRFEEVRLRGRKR


General information:
TITO was launched using:
RESULT:

Template: 4WW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 985 -33901 -34.42 -153.40
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -34.42
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.185

(partial model without unconserved sides chains):
PDB file : Tito_4WW7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ww7-query.scw
PDB file : Tito_Scwrl_4WW7.pdb: