Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTPFDEVRRTVTGHGLELVRAHPRRDRLHLDLRGPDRQRVIGQWIDDATEATRVADATPGRVERLGSRLVLQHDGADRRLPALADLVAGGAELVVHRPERRAVVRYQRGD--GYVYTKVVRPSRTAELVRRVRAAA-AVPGLSAPEVTQWDE--AGGTIVLTTLPGQTLHDLLTGV--VPAVVATEVGRAVRTLHSAATAPDGTTTHDLAAEVDATRALLDLARTHRAL-QPREALVVDRRIAAAAATIAALARPAAPSLLHRDLHDKQLLVD-GASIGMLDVDTLGLGDPALDLGNLLAHLDLRVRQGWTQRETAAAVEQGVLDGYVPDDRTRAATAGYRALAAARLEALYAFRPGDLPGGGQPAK 4GKI Chain:C ((39-270)) ----------------------------------------------------------------------------------------------------ATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE--MHKLLP-FSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFS----------PSLQKRLFQKYGIDNPDMNKLQFHLMLDE----------------------

General information: TITO was launched using: RESULT: Template: 4GKI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 933 1176 1.26 5.27 target 2D structure prediction score : 0.72 Monomeric hydrophicity matching model chain C : 0.65 3D Compatibility (PKB) : 1.26 2D Compatibility (Sec. Struct. Predict.) : 0.72 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.252

(partial model without unconserved sides chains): PDB file : Tito_4GKI.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4gki-query.scw PDB file : Tito_Scwrl_4GKI.pdb: