Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNKYHLVGQIDLENLNKIIIPVTKNVFNSRISEIKRFPTGSCHFVYDAVLESWENLVFRIGYSDSNKAKIGWSVFWHGKLKELG---IKIPALLYHDVSCIEYGKPFTVSERIRWDDIWNAIDSLTDENLDLIA-KEIAGIQNRISTLEPWRWFWEMTSYDDANLKGKWREFVLEKFEK-AKMAL-SEG---GIFDDSYIERVREALDRNSWYLENVKGTMFFDDITSKN--------------IIVDNSEFSWVVDFDTMTCWDRLYWL------GLCNMAFIYLEREIY-ISYLIRYLGCSEDDISA-MNL-YTLLFCLDFMSEIGQKFNKEEAIIDYIKAERYKSIFERICNNIK
2Q83 Chain:A ((11-346))LSAEDAKKLTELAENVLQG--------WDVQAEKIDVIQ----ALVWKVHTDSGAVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPF-----ELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKL------GRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI-


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1256 -34850 -27.75 -116.17
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -27.75
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.225

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: