Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---NCEITILQGESRIGFVNVPSS------GKVRENIRNWWYTISCDEDCNPKISGF
5TJ5 Chain:L ((1-57))YTVVGVFIVVSAMSVLFWIMAPKNNQAVWRSTVILTLAMMFLMWAITFLCQLHPLVA


General information:
TITO was launched using:
RESULT:

Template: 5TJ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 71 -6472 -91.15 -134.83
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain L : 0.59

3D Compatibility (PKB) : -91.15
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_5TJ5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5tj5-query.scw
PDB file : Tito_Scwrl_5TJ5.pdb: