Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAVRALVASRLAAASAFTSLSPGGRTPSQRAALHLSVPRPAARVALVLSGCGVYDGTEIHEASAILVHLSRGGAEVQIFAPDVPQMHVIDHTKGQPSEGESRNVLTESARIARGKITDLANLSAANHDAAIFPGGFGAAKNLST-FAVDGKDCKVNKEVERVLKEFHQAGKPIGLCCIAPVLAAKVLRG---VEVTVGHEQEEGGKWPYAGTAEAIKALGAKHCVKEVVEAHVDQKNKVVTTPAFMCETALHYIHDGIGAMVRKVLELTGK
3L3B Chain:A ((3-211))------------------------------------------LNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKK-KESVGEVRNILVESARIARGSVYDIEQIRVEEFDMLVIPGGYGVAKNFSNLFDED--NDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKVKVTIG-E--------------LIDKMGGVHVDCPTIKSVKDDVNRIFSCSAYMRNDSLYNVYLGIQDMI---------


General information:
TITO was launched using:
RESULT:

Template: 3L3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1219 -85777 -70.37 -431.04
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -70.37
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_3L3B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3l3b-query.scw
PDB file : Tito_Scwrl_3L3B.pdb: