Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLDNSDKYLLPLLPKIILEKTNKKAEKIKFIGGGSFGRVYKAELSNGETI---AIKAYRIQGSQYEEANQLNLLSKN--TSVKTPKVIFTYEDENTAILAMTFVEGKNVLNPLFLFKSKKQKQLFANDVVDGMLQWHSVTGEKFGALSNPTYD---SWYEYYKTVNQELWLKDLAKLAKNGKFSKKRMQLLYDATEIFNKLPEETTAPVLIHSDLNIMNIMADPKTLKLTAFIDPCTSIWADREYDLFQLRNMWGDAYGLYETYKKKYKLSKYADFRVAYYGAMLEASMRLKGGLILPFWEDLTMMRLKKEIKMLNNL
5IQH Chain:A ((25-235))-----------------------NFKVDSIEIIGSGYDAVAY---LVNNEYIFKTKFS---KKGYAKEKA-IYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMH---GLDYTDISECTIDNKQNVLEEYILLRETIY-NDLTDIEKD--YIESFMERL-NATTVF------EGKKCLCHNDFSCNHLLLDGNN-RLTGIIDFGDSGIIDEYCDFIYL--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 733 -12999 -17.73 -64.99
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -17.73
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.229

(partial model without unconserved sides chains):
PDB file : Tito_5IQH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqh-query.scw
PDB file : Tito_Scwrl_5IQH.pdb: