Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNTYFELSDDFENIIKNTLNDKQIISIKQNPTGWTNIVYEVETNEGNFFFRFPRDEFWSRTIVKDYEFAKYIYG------KTNFDTVKLELFYDNDR-PFSVHKKISGIPLA-EVMNDLSSDEVKTISDEIAKFMYQLHCLDFKESKIFSINNIGLNLTDFLDELLNVHVDKND---------MNFWIPTAIHSDDICLVHGDLNSSNVLLDENRHVAAIIDFGFGGFGNKYNDIGRIIGRCPTSFKNEIINSYEQYSNSKLDSKLLDTNINTWTDIDNSYINYMRTIGIYK
5IQA Chain:A ((18-231))--------------LIEHYFDNFKVDSIEIIGSGYDSVAYLV-NNEYIFKTKFSTNK------KKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCD----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 597 -24290 -40.69 -123.30
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -40.69
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_5IQA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqa-query.scw
PDB file : Tito_Scwrl_5IQA.pdb: