Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDYSKLHPKTAQRILNQYGIEDEFTLKALSLGISNSNYKVDTGNKQYLLKVSNDKGFAELC---DEQHILKHLKDLGFPYSICALPTIKGELVYKQEDLFGVLFPFIKGIPPG---PSDITC---------REIGRALGKLHATTKDKELDVREYAAIGQDAKTIREFIDDPSCPADFSEAFHQVFSDDLK-GYLSVNKTRCLIHGDLYYDNTLFWDESIAVLLDFEQAGLGNALLDLGISISGSCIEKGQINPQLVESFCEGYKLSHALNDNEKNYLADAILLGLFSIALWRIKRFKHGNLNPMLENSYRDLLNKAKSFKTIIDSKGLKFEL
4R7B Chain:A ((47-282))--------------------------------GMTNQNYLAKTTNKQYIVKFFG-KGTEKLINRQDEKYNLELLKDLGL-------------------DVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAK----ELRGEFAPFEEIKKYESLIEEQIPYANYESVRNAVFSLEKRLADLGVDRKSC--HIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDL-----AALFLESEFTSQEEETFLSHYESDQTPVSHEKIAIYKILQDTIWS--LWTVYKEEQG---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 946 25270 26.71 114.86
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 26.71
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.194

(partial model without unconserved sides chains):
PDB file : Tito_4R7B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r7b-query.scw
PDB file : Tito_Scwrl_4R7B.pdb: