Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAAVLPQLCKVEMFDKNARFVGMARGNWDKDFVIKGH-----TIKCNTRCETKDVVLP-KNWSVKG
1SS3 Chain:A ((1-50))--------------DEAQFK-ECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPKN


General information:
TITO was launched using:
RESULT:

Template: 1SS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 78 90 1.15 2.05
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 1.15
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.216

(partial model without unconserved sides chains):
PDB file : Tito_1SS3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ss3-query.scw
PDB file : Tito_Scwrl_1SS3.pdb: