Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRRHMNRFTIEQVLDIAEVIHSRGSRKVWRIG-DYILKQTPYE----GVNNEVATLRFVQQH--TTIPVPVVYDEWLSPDRRFHYILESRIPGKSLKQ-CWGVLSRKGRERIARTVLKYMQELSQFRSDRLESISSNKLRLNNFVPKPYKVLLNIWRTDNDIFDNEYRPALLS-SGVDDGVILVLKNTMPPCQGQYTLTHGDLFTGNIIVDPVKEQVTGIIDWESAGFWPAWFQYARITLGAGGWDDEWKALLSRAMKATHLPPHSKHGRIWWDAVYELLDHPGSSLAREWIKEIIRYLAGENVSLNNYDGFGL
5IQI Chain:C ((28-257))--------------VDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYISDE--LSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQ-------------NVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVF-EGKKCLCHNDFSCNHLLLDGNN-RLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIG--TNFGEDIL-RMYGN---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 874 -29816 -34.11 -134.91
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : -34.11
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: