Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASAARPIRDYLPGLLVLAGGLYTVYYYYMYWIRVYGALCLPGYGDPVKVEVTQGIWIRLDAI-----LFPTV-FGVILALLGVMLVWKKKFGAAVVAL-VLSATVINWPAFIMIAGGALLGLLFWRKTLLPTIDLPDETMEWVDAEAGLSVLKSFRRLP-----SERLAYSFHNEGGGRFVVKETSS----------AESAERETRVLNAAAENGLPAPEAKATDGRFLLMPQLDGFPF--LQPLDFEAWTDEIAGILTTTHSAPKPDMKARRRPAEPVIPDRAFDRANWERAARIFREETADAVPVFVHGDFEPANVLFSGGRATGLTGWDHA-GSGPAQLDVGRMRVALELIHGGNVADRFLAKYKNLSKDRSFRYSRYWDLLAVYGWLEQDPGSIASHWRRFGITTLSEDEVMRRLERFVKTLTDKE
1TQI Chain:A ((1-282))-----------------------------MNIAELYGKM------GKHSWRI-------MDAIFKNLWDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQKDYEGSTFTFIGLSLYSLHRLVR------------------SGKV----DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKL--QGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG------------------------------------------IVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEG------WREILERDVRNIITYFSRTYRTEKD-----INSAIDRILQE------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1TQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1194 -40044 -33.54 -164.11
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -33.54
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.255

(partial model without unconserved sides chains):
PDB file : Tito_1TQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1tqi-query.scw
PDB file : Tito_Scwrl_1TQI.pdb: