Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYPGINETQLELIFSRYGKDCKIEPLQEEASTRRY--FRITSVNGKEEVVCADETVNEDFIVISEFLNANGIRVPRIHDTN------QNLGLTFMSFEGLKDFSTYNLNDYKNKFPILIDLILKLQSLDP-PSLVKTRKFDTEKLSFETNLTLDKFEAFRKQFQIKTDITNEAKAFIEETVGYLNKYPINVFTHRDFH-CRNILIAPNTDYALIDFQDARMGVPQYDLASILYDAYYPLPRDFRSLMLKSFRERNVDQTKKFNDTFYLQALQRSFKALGTYFRMVTDHKKDKFKTSIISCLNQLEEIIQLGMFADSLYIFVRSLREELSRHKEFKNL
5HEA Chain:A ((4-295))------GELISIIVPVYNVEKYLKRCLDSLLRQTYKNFEIILIN--------DGSTDNSSIICEEYAKIDN-RIQILHQTNAGPSAARNAGITYAS---GKYITFVDSDDFVEEF-YLEHLYRALVDNGSDISVCNFNSFNEDRQSFLFSITKEKY--FCKNYTIAEWMDLNLFLTFTFS-------PTKLFKAELFEGIRFPLGRLREDDATI----YRLYLKASQITFINEGSYYYSQRDDISSMISNAEERIALLASMGYDL---------------------TEQIKSYKGRLKKCCEDALR--------NGQIELYQQCCNKLDLIENYPKE


General information:
TITO was launched using:
RESULT:

Template: 5HEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1368 10802 7.90 40.61
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 7.90
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.256

(partial model without unconserved sides chains):
PDB file : Tito_5HEA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5hea-query.scw
PDB file : Tito_Scwrl_5HEA.pdb: