Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSWSRVYCSLAKRGHFNRISHGLQGLSAVPLRTYADQPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET------LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASR---GIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKN---QVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDED----TIVSSTGALSLKKV--PEKMVVIGAGVIGVELGSVWQR-LGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGK---AEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGP-MLAHKAEDEGIICVEGMAGGA--VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDG----MVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHP---TLSEAFREANLAASFGKSINF-
3LAD Chain:A ((1-472))--------------------------------------SQKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFK--LHGISTG--EVAIDVPTMIARKDQIVRNLTGGVASLIKANG-VTLFE-GHGKLL-AGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQ-DVIVD---STGALDFQ--NVPGKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKFLPA-VDEQVAKEAQKILTKQGLKILLGARVTGTEVKN-KQVTVKFVDA----EGEKSQA-FDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRG-AMLAHKASEEGVVVAERIAG--HKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEG----VAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMM--VFAHPA-LSEALHEAALAVSG-HAIHVA


General information:
TITO was launched using:
RESULT:

Template: 3LAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2518 4159 1.65 9.47
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 1.65
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3LAD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3lad-query.scw
PDB file : Tito_Scwrl_3LAD.pdb: