Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFSNNKLTRDELLSRFFPHYHPVASLSQSGLSGGSVI-ISDG-DRRHVLRQPHDPSAATYHFRRQYHALRRLP-AR-LAPTPLFYSP--CWLVVEYCAGEVKS---------ELPASPQLSGLLYDLHQQPRFGWR-VS---LTPL----LAQYWQRCDPARRKPRWLRWHQRLRRQGE-PRPLRLAPLHMDVHAGNIIHNES-----GLRLIDWEYAGDGDIALELAAVWITPG------ERRRLVEAYARRAAIDAQQLWRQVARWRPWVLLLMAGWYEMRWRQSGDRQFITLADEIWCQLDNERKG
3CSV Chain:A ((4-303))----SREDEIRDFLATH-GYADWNRTP--------RYQRLRSPTGAKAVLMDWSPEEG--GDTQPFVDLAQYLRNLDISAPEIYAEEHARGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRDVPAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQRNMRILGIFARLSQRFGKRHYIEFVPRVWAHFERG---


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1140 -15110 -13.25 -58.79
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -13.25
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: