Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKQTLSYDEETRGKTVINHMGGVFLYNRPEQILEQYELEVKSISRGR-----DSYQCDTEQG-PKILREYRGS----KERAGFLADMLDHLSGQG-RTVETVMRTKEGEPFSVNEEETKYILYQAFPGAECDTKNRADMLSAVRELALLHQSAQNYEGSVPEFL---KSGQNNLLLLYEKRNRE--LNKVRNYIRAKKKKNDFEMMFAVWYPEYVKKAQETTDILKDLGIQEQLIGFCHGDYNQHNVIFSREGIAVVHFENFLYQESVGDLANFIRKMMEKNNWNAGLGMDLIRGYDRVRKLSPEELKYLYVYLAYPEKFWKIANRYYNSHKAWLSGRNIEKLEKVVAQEDAREQFLQMLFHFTV
3F7W Chain:A ((7-263))------------------------------ARVTELTGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----------DRTLAMEWVDERPPT---PEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAAD---RGAL-------TPGDVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDDGAVVIDPA-AHGGHREADLAMLALFG-------LPYLDRVRDAYNEVAPLAEGWRARIPLHQLHPL-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3F7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1195 21893 18.32 90.84
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 18.32
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.244

(partial model without unconserved sides chains):
PDB file : Tito_3F7W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3f7w-query.scw
PDB file : Tito_Scwrl_3F7W.pdb: