Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFQPKDRPADAFQQPLTADQIELLCRRALGSGVRSAVEIGWGGYNNTYRVELADGPAILRVAPE----PARQNRIEHQFMRNEYLAAPYFAPIAPLMPRTLAADFTHQVIGRDYVLQAVLPGEPGPEVLSARTPEERAPYFRQLGELARAVHDVRGPGFGTVAGPHFATWSEALI---AYFEDNAAD-VEDLGLDGADLRAVAAWAKRDAALLDEITEPR--LLHGDLWHVNVMLTPSLQIVGVFDHDRSWWGDPAADWTIRMASV------KTGSKRDWFWDTYGRPDESPSARRRALYYEARHLGAVRLERMRLKERQVEETYADLAEILAALESE---------------------------------------------------------
2OLC Chain:A ((5-396))---------KTPLYETLNESSAVALAVKLGLT--LTCQEIGDGNLNYVFHIY--DRALIIKQAVPYWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPH-LSQHIGEFLGKTLFYSSDYALE-PKVKKQLVKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHE--TKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDG---YLTDTLSHIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK


General information:
TITO was launched using:
RESULT:

Template: 2OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1404 -38597 -27.49 -127.38
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -27.49
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.274

(partial model without unconserved sides chains):
PDB file : Tito_2OLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2olc-query.scw
PDB file : Tito_Scwrl_2OLC.pdb: