Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKPRFTLAEAKAMARDEFHVRVAAIVELNSYDDQNYK-VTAENGAVYVLKVHNGVESRDEGLLDAQSQLYERLRRKGVAAPYPVDSNPLADGDATFALRLLEWVDGDLLSSKE-----ITPGLLATTGAFLGRIRLALDDFDHAALHRVHLWDGRQFPALASFADGLVDAGCDVDKAADVHRAIANFDAVVAPAAAQLPLATLHGDFNDANVLVGAE-----TLGVLDIGDSVHSWRVNDVAVGMAYVVV
3CSV Chain:A ((4-231))----SREDEIRDFLAT-HGYADWNRTP-------RYQRLRSPTGAKAVLMDWSPE---EGGDTQPFVDLAQYLRNLDISAPEIYAEE------HARGLLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLD--PETLSEMTRLAFSEYRYAILGDAA----EDNRKRFEHRFAQIL-SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDA--


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 809 -2281 -2.82 -10.91
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -2.82
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.230

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: