Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQQVISFLNENYPLHIHTAKA----VTNEM--YRC-IDDQGTYYARITNYKPYEEQLEEVSWTNALYREGVG-VAPAIPSCRGQIVELMPPKDIIVVVYKAAPGIHLPRGEWNADVLAELGRQIGRMHRITQSYEANHR---LHHLGDWHDQEEYNF--EQ------YIPAEETAI----RAIAANVLAEV----KKLPRERATYGLIHGDLWLENILVDRGSSLTMIDFQDCEKHYYMYDLAVPLYSALEFSFAGAGNIRDYGISIANALLEGYQEEHTLDPEMLKQLPLFLKLKEIFEYNLMNMYWDRERLSEEQIRIMNLYRLRIEHHVQLLEWD
3I1A Chain:B ((10-272))---QLIELLKVHYGIDIHTAQFIQGGADTNAFAYQADSES-KSYFIKLKYGY-HD--EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQL--KHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNV---------WNKPHEIQYFYEGYGEINV----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 872 -18470 -21.18 -78.26
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -21.18
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.251

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: