Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHVPLSIHTTSYSMAAWDITTADEAWLIELCHKSADEGRQIGGQEHGGPKVVRIS-----DRIVAKYG-NIRR------SELAAQEVAYHNTDRSIVHIPKVHRFFESDGQSYLFMEYVEGQTLEDVDFET--------HKDIPIRVANILAHLQQILGDCDSPGPVTGGEAHGYIFGDEGAGTAFDSIEDMNVYMNKRLDKMNEYLSRQEDQRRFDHLDLTPYALVLCHGDICRRNIIFESDGSLCLVDWGFAGFYPRIFELAAISYVVQNNAAFKDPIIHEFTKLLSLTDKEKQDIDRFRAVRFANLRWSFRDRRTTAEEDKFIQELYETQKRIKEEQETAGIQSFIISELLDGLL--EQKSRPDLEVRHVPRPWTGSQTAIGHVKRVVVVGLDVNVASFILAMKILSSRRIFVIRTTQGSPK
4JXF Chain:A ((15-264))------------------------------------------LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL--KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL---------------------------------------------------------------------HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---------------------------------SDVWSLGC-----MFYTLLIGRPPF----VKNTLNKV---VLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSV-LDHPFMSR---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 839 -29586 -35.26 -148.67
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -35.26
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.182

(partial model without unconserved sides chains):
PDB file : Tito_4JXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4jxf-query.scw
PDB file : Tito_Scwrl_4JXF.pdb: