Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKTEPSINLSLKRLVENPSYADACDILDERPLEFWLPTIEVILSQHQLAKKTVLRISNGSNALFDI-DNEYILKLVPPNWDYQGISEVTSLTLLNLANHSENLSLAVPKMIGFGRVDNWFYVIMTKLKGLSMATVWPDLNTAQKL-PLVKQLGQFMTELHQITSTQAFTPDPRLSVD-WPEYIKGLISDSVPRHARKGVSPELVTQISDYLQAADSDFNDIHA-VFIHMDLHPWNLMVEKHHGHYRLCGVVDFGDALVGNCQLLELATPIIFVCQGNKTLIDEL-VANYSPLNEVYLDRQVLQRQLMAVSLI-RPACDFNFVLQQVPQSGKRDSWQAIAKQLFPLYKGRPA------------------------
3CSV Chain:A ((4-333))------SREDEIRDFLATHGYAD------------------------WNRTPRYQRLRSPTGAKAVLMDW-------SPE------EGGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALFTEVINN--DPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAIL-----GDAAEDNRKRFEHRFAQILSAQLE-GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH-RAYDLVSLLQDARRDVPAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQRNMRILGIFARLSQRFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILNALPAPAPEVLERLRA


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1355 -10122 -7.47 -34.66
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -7.47
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: