Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSDYVDDESSVRINRKMELIKVPDESAGNAMIGISYLTREDGKIIADRIKELCNESRYNNSFWEEALYIKDKMMVSAKTVSSKDVIEINTYEQLREIDENSDQLDTDAISVICEAFKINKNDIYNITVLKKGMTNRSFLFECKG----KKYIMRIPGEGTDMLINRREEAEVYNVVNKEKICDNVIYINPDNGYKITEFIENSRVCDP--FNEDDVKRCMDKLRTFHNLKLKVNHE---FN----ILGQMKFYESLWNE-K-----SVYDDYELTKANVLSLKKY----------------VEDNVSEKVLTHIDAVPDNFLFAGDEIRLIDWEYAGMHDPHVDIAXXAGMQDPHVDIAMFAIYSL------------------YDREQTDRLIDAYFTGNCD------K----KTRLKIYCYIAMCGLLWSNWCEYKRQL--GVEFGEYSLRQYRYAKDFYRIFINESEQIKEELK
3MES Chain:B ((73-410))----------------------------------------------------------------------------------------------------------------------------IEVKQIFSGLTNQLFVVSIVNELKHPRILFRIYGKHV--FYDSKVELDVFRYLSNINIAPNIIADFP--EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNQIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLLQTQNNIRMIDYEYSAINF-------------AGADIANYFCEYIYDYCSEKQPYFKFKYEDYPCEELRKLFISVYLSQTLQEQVMPSQQIVHIMTKAVEVFTLISHITWGLWSIA----SVEFDFTEYANTRFTHYLQKKKELI-----------


General information:
TITO was launched using:
RESULT:

Template: 3MES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 955 -29017 -30.38 -112.90



3D Compatibility (PKB) : -30.38
2D Compatibility (Sec. Struct. Predict.) :
1D Compatibility (Hydrophobicity) :
QMean score : ?

(partial model without unconserved sides chains):
PDB file : Tito_3MES.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3mes-query.scw
PDB file : Tito_Scwrl_3MES.pdb: