Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -ME--LGNFQKSVD---SDEIKTMAFEIIGEPVKAVSRICEQWGEA-EDEVREY--------DVYVIETDAG---------KYTLKKTGSK--------EAQIYAQYLSKGEFHVPQYVGMRQAEDADWICMKYVEG-----NDMRDMTDETTEKAAETLSKIQSYFWTPSMDKAPENEVEQRFVEYWKRVLRRASS-----VADD--------PILRKAYQMFLDR--QLTCPCTMSNGDFLQWNVIYDGENVVMIDWGFGGMMPYPLDIARFLAH--ATETRSTFPFYMNDAQ----KELFLDRMYEALKT--KISREQFNLDVKLATLNEYIEFVEA----------------EEDEDGWYLEHAQALAEELLNL-------- 1NW1 Chain:A ((32-426)) GMKELLSTMDLDTDANTIPELKERAHMLCARFLG------GAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERH--LGPKLYG----IFSGGRLEEYIPSRPLSCHEISL--AHMSTKIAKRVAKVHQL--EVPIWKEP-DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLP-KRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSE-DLVQETLPFVPVSHFFWGVWGLLQVELSPVGFG--FADYGRDRLSLYFKHKQLLKNLA

General information: TITO was launched using: RESULT: Template: 1NW1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1175 66634 56.71 237.13 target 2D structure prediction score : 0.74 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : 56.71 2D Compatibility (Sec. Struct. Predict.) : 0.74 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.506

(partial model without unconserved sides chains): PDB file : Tito_1NW1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nw1-query.scw PDB file : Tito_Scwrl_1NW1.pdb: