Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------CEVLISKKSGGDGPVKSSCIPKSGSKVIVVNGKTVTVSADGSCKFSSKD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5DL8 Chain:A ((17-407))NPNQQTEDEWKFTLKNAYINRDFDNDALKDTGSWSQAASLFYK-------------SKMHDTPLVIADKPITIGADASVQYAVRLSSDKHVADTVLPFNKETQSQASDYLKYGATLKLGYDKTLLSVGELWLDLPVTAVDASRQLLTSYWGTNLKSQLSDQLYAEIGRVEKVSPRNEEDFKKFSFTANGITKESDGLNYIDLRYQFTPSLKGEYYFGNLEDLYNKHYVGLEHTWKQPTFALTSKFKYFNAKDDGNTFDIDAENIGLLETVKVKNHTFGLGYQQIIGESAYPLPDGFLPETYFINWNATGFFKEDEKSYHVMYGYDFKDYIPGLNAMVKYVYGHDFKAANGEKNHETESNVILNYAFQQPLLKGFALQYIRIDYNVKHGNDFGEDRLFVNYTKKF


General information:
TITO was launched using:
RESULT:

Template: 5DL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 36 -267 -7.42 -7.42
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -7.42
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_5DL8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5dl8-query.scw
PDB file : Tito_Scwrl_5DL8.pdb: