Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------------PEHCFVRILKYEIPIHGDGYLVGSDVNWWVG--NQKVDFHIN--NDCTIQRRGGTQEKK----------------------------------------------------------------------------------------------------------------------------------------
3OPY Chain:I ((5-351))DSIIRDLERENVGPEFGEFLNTLQTDLNSEKPPIEQVKSQLETHFNLAHETQEFSRKNDNAPVDKLLTNYYNNYEVNVLEFVLQMGFSRDLSIPLNVWFVLDMISQLSTSKQDLPLDYYLVLNNSQTGKYSDFVRYLIYEAVGAEIHLANRGPIRGNVGAGDRKITFHLLCKKTARMILVGDDRETDFEMSDRSFVTLLLDYYQRVGTTKKIDLLLLTNNFDTNMNNKLQQLKILESLNMLKSNCYVLDYQITVDQVTANFNSYVEGIPAFRRHEIANFLKKRKTPKNADELIFKYVGRWNICYQKKFHQGNISIHQISGYLD


General information:
TITO was launched using:
RESULT:

Template: 3OPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 80 7132 89.15 129.67
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain I : 0.54

3D Compatibility (PKB) : 89.15
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.266

(partial model without unconserved sides chains):
PDB file : Tito_3OPY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3opy-query.scw
PDB file : Tito_Scwrl_3OPY.pdb: