Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFRSNNPITRDELLSRFFPQY--HPVTTFNSGLSGGSFLIEHQ-GQRFVVRQPHDPDAPQSAFLRQYRALSQLP-ACI---APKPHLY-----LRDWMVVDYLPGAVK-------------TYLPDTNELAGLLYYLHQQPRFGWR-I-----TLLPLLELYWQQSDPAR-RTVGWLRMLKRLRKAR---EPRPLRLSPLHMDVHAGNLVHSA-SG-LKLIDWEYAGDGDIALELAAVWVEN-TEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
5IWU Chain:A ((1-299))-MSKDIKQVI--EIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRRED-VMPRTKVEKQALDLVNKYAISFQAPNWIIYTEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAFGEEGLEALILAYKEIGGYYWPKMKEHIIELNAAY---PVSIAEFA-LVSGIEEYEQMAKEALEV-----


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1123 6179 5.50 23.67
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 5.50
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: