Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEIKLGKKISEGKTVDVYESGD-LAVKVFKPDAPKTVVFYEAFMDSKVEET---GLNVPKIKEVELIDGKWAIATELIKGKTLAQIMQE--EPENCDGYLDDMVELQLSIHAKKVTGIS-----KLKDKLREEIESL----DVI---DHIKRYDLLTRLDS---TPKHVKLCHGNFGPENIVVTDDNK-VYIVDWIGASAGNASADVAKTYLKLALTS-TETAEKYLNLFCKKTNTAKTYVQEWLPIMAASTLAKGVTSKEEKDLLFTWLDVVDYS
5IQI Chain:C ((29-257))----DSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGN--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 789 37383 47.38 181.47
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain C : 0.63

3D Compatibility (PKB) : 47.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: