Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYNLNVYIRGDNMSSIPFSR-ISRFWGLKRKIVLEKKTNAR-A-FI---VRSGSIFYVLKRRVASLPSRSCQTELLKYLVQSGLP-VSAPIPSGSGEFEVKIGKYVYSLFPYIEGEKADSNISNATPEMAEELGIFTGRLHRVLKEAEG-SFFERTNLLKSLTS-AIRYFNSTG--------SF----FSRSDMEMIEEFFTDFYK----L-YYKLPVQIIHGDYHPGNIIVHEGKVSGIIDFDCATREVKALDLAYLIHSVFAEFSRMGSPSLFLYLLPHLLEGYCLENTLSFDERESLGYLLAAISIIQIHYFSANGLSDEANFASTVFRWIYLNNHRIKEKSGLVLTRSKKAV
3I1A Chain:B ((4-292))-----------QPIQAQQLIELLKVHYGIDI-HTAQFIQGGADTNAFAYQADSESKSYFIKLKYG-YH-DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGFTQN--LTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNVW-------NKPHEIQYFYEGYGEINV-D---KTILSYYRHERIVEDIAVY-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1043 -21357 -20.48 -81.21
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -20.48
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: