Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEKDRAVVTELLQKAGREDFIPLQEN--QLAGDGSSRRFYRLASG--------GETLIAVLPAGEEA---KDRAESRAAYHIGGYLLA-CGTPVPAIYGWDE-----ASGGLLFQDLGNTRLQDVAH---------TEE---GRQLYRQLVRALAGMNCRARGIDS-SWCWDSPCYDRSLM-LERESGYFLRAFWQGLLGQEVPIGLAEEFSSLADAVS---LYSTDFFLHRDFQSRNIMIHA-GRPSIIDFQGGRRGPLGYDLASLLYDPYVDLDE------------DFRALLWEDYLAALGAQIDISREDFAKQYSLLACQRSLQIIGAFSWLSAVAKKTFFVQFIRPSLLNLEKILSAPYYQNYRVLRQTVRRGLSLYR
3ATT Chain:A ((21-316))----------------------EVTVESGVDSTGMSS-ETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLT-----DTTLHRHFNWVRSWYDFAVEG---IGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALT----GVELGDL-HWFYVYSGVMW---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ATT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 998 -21479 -21.52 -88.76
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -21.52
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.247

(partial model without unconserved sides chains):
PDB file : Tito_3ATT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3att-query.scw
PDB file : Tito_Scwrl_3ATT.pdb: