Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----KLCKWTVL-NSEGEIIDSGSC--LNTEYMKHGDIHVEFENDCTPIIFGADRVAEKVTIKG---
2KAF Chain:A ((1-67))GSEEHFVETVSLAGSYRDWSYSGQRTELGVEFLKRGDKIVYHTLESPVEFHLDGEVLSLDKLKSLLS


General information:
TITO was launched using:
RESULT:

Template: 2KAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 188 3096 16.47 54.32
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 16.47
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_2KAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2kaf-query.scw
PDB file : Tito_Scwrl_2KAF.pdb: