Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHPFDQLTPDLVLDAVESLGYLSDARVLAL-NSYENRVYQVGIEDGEPLIAKFYRPDRWSDAAIREEHAFSAELAEC-EVPVVAPLSRDGESLFAFSGFRFALFPRRGGRAPEP-----GNLDQLYRLGQLLGRLHAVGATRPFEHR-EALAVDNFGHASLATLLEGNFIPRSLLPAYESVARDLLKRLDALFAEVPYQPIRLHGDCHPGNLLCRD--DVYHMVDLDDCRMGPALQDLWMMLAGERHERLAQIAELVDGYNEFHDFDP-RQLPLLEGLRSLRLMHYSAWLARRWDDPAFPPSFPWFGSERYWGEQVLVLREQLAALDEEPLRLF
5IGI Chain:A ((4-282))----VTTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAE-VSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDR---VRREF-VVNDKRLHRWQRWLDDDSSW-PDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVF---GEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFAL-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1208 -49271 -40.79 -184.53
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -40.79
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: