Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYTLGQKIGEGGCSEVFEVGDNRIIKLAKENTSFEALRREYLNNCIAWEC--GLPIPQPFELTKMSGRPGIVFEHIAGKTMMERFFNQVIVSHNNEVKQADVQLTAQLLFRVHQALAEGKE-L-P-----CQKSII---KS---NILSVNYLSASEK---ESAISLLES----LETKQCLCHGDPNPRNVIVKDDGEAILLDWMNATIGNPEADIAEYIVMIRYAVLPSSFPEETRDMFDSIREDLIDIFIDEYYRLSGISYDDVVPWIIPILARKLSADAISDVEKKKLVAEIRRDLGKQKNRV
4DCA Chain:A ((42-276))-----LRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCST-DD---------------FGKEFGRKVLKYYQHKAPEVAE------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 772 -1601 -2.07 -7.51
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -2.07
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.251

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: