Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRDAHERLTERFEDYRIVRKLRRVPPHEVYEASVDSRRAVYKGDTGPTGNAAVEGRVTALVGRETAVPVPETLRVGDDCYVTAWHPDAPAPDSSDEADEAWAAAAGRGLATLHTETEPLVDGCGPFRAADGGVRVETADDWHAAAVDHVRHRRSVLAEYGHADVADAAVEFLRDRPDAFDGAGDPVCCHGWWTPEHVAVEDGRVACVVDFEHATAAPGEWDYWRTVTPTFAACDEDTTAARRAFRRGYESVRPFSPGFERRRPYYGLLNGVYYLQSLYVQDRHGPAATAERAARFRARIFETISELDRGRLGRTAHPSRRVAFARHTPTSVMSRFDAVLFDLDGTLCENEQDVEHLYFGAFERAEVEPFGAPSDLWAVLEGPPTTPDEFEYYREGFRTVAAEHGRA-EADVSAVAREFVDGIDYGAVSLLGGAEAALADAG-VGHRVGLMTNGPEYRQSVKLEALGLEDAFEVVVYAGDMERRKPHTDPFDRAVEALGVD-ASATLYVGNSLKYDVAGAREAGLPVAWYPDGDADP---GSYDPDYVVESLAELADVLDGTVE
3SD7 Chain:A ((26-239))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKED--LENLDQFI-GP----PLHDTFKEYY----KFEDKKAKEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRK-YDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL-----


General information:
TITO was launched using:
RESULT:

Template: 3SD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1053 -2444 -2.32 -11.75
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -2.32
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.181

(partial model without unconserved sides chains):
PDB file : Tito_3SD7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3sd7-query.scw
PDB file : Tito_Scwrl_3SD7.pdb: