Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePPSATEKCAYTIYRVASKNGLKAL--VREGDYI-----AY-KNWDQEIHGVQVHFDGEC-NPKYKSD---------VYVF------
1Y8R Chain:C ((14-97))--GDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG


General information:
TITO was launched using:
RESULT:

Template: 1Y8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 179 4610 25.75 76.83
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.70

3D Compatibility (PKB) : 25.75
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_1Y8R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1y8r-query.scw
PDB file : Tito_Scwrl_1Y8R.pdb: