Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------KLCKWT-----VLNSE-GEIIESGSCLNTEYMKHGDIH--VEFENDCTPIIFG----
2KSW Chain:A ((1-66))VPVGSDCEPKLCTMDLVPHCFLNPEKGIVVVHGGCALSKYKCQNPNHEKLGYTHECEEAIKNAPRP


General information:
TITO was launched using:
RESULT:

Template: 2KSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 173 -2926 -16.91 -65.01
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -16.91
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.140

(partial model without unconserved sides chains):
PDB file : Tito_2KSW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ksw-query.scw
PDB file : Tito_Scwrl_2KSW.pdb: