Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAPFSIKQADIQQQLTAAIQKHFPAVEIADIRFELV-GGLSSKSWRIRGPGIEWLARRQSPTERKMGVDRQREFALLRRMSAIGLAPRPLLWRD--DWLIVEWVPGR-IATSDEFL-MMLANGEVARVLSQLHRLPRSGH-PLDIKMLFAQHWQLMDPHR--RSPVLLRAHHYFQ---RAPLPTPLALAPLHLDVHAENLLITPQGTMLIDWEYASDGDIAFELAFIVRASQMDSMAQRYFLQSYQRHRRGFSVNRLQQQMRQWFPWVDYLVLMWFEIRWQQTK-NPEFLADIPALYHRLQLGHRLQPD
3DXQ Chain:B ((2-283))----------MTDEARAKLAAIPMLA--GYTGPLERLGGLTNLVFRA----GDLCLRIP---------NRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTGERMWIVDWEYSGMNDPLWDLGDLSVEGKFNANQDEELMRAYFGGEA---RPAERGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFARCKA-------


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1223 1983 1.62 7.57
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : 1.62
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: