Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIQQEIFSILGIKGPVLLGEGSESQTYDYTADKVVKIYKGPVEQDNLDHLCSIYTWLSTHHLPFAVPEIYAIESH---EGTVYLIEKKLAGRPISAVY-AQLQMYERQRLLSNYLEAVRHLQGVVLPTQPYGSIFHAPGPSPVPYQSWRKFLRETAPLKLPQTQDDLR-QEGIDVARLLEKFFQDIENAPDTPEKNFVHGDYFFGNVLVDDE-LEISAVLDVSWWSVVGDHLMDIAGAVMFLDLYEYVTPQEIASLTQQALALYGPEILTAIRIYGVYYSLLLSDCKL--LDPAAYSWSIKRLREYMQ
3N4U Chain:A ((14-295))----EQLYPDFTINTIEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNK-LPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLD-------FREKINEDN-KKIKKLL---SRELKGPQMKKVDDFYRDILENEI--YFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGD-AAISDPDNDFISLMEDDEE---YGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEEGLNEI-----


General information:
TITO was launched using:
RESULT:

Template: 3N4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1177 -31770 -26.99 -115.95
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -26.99
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_3N4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3n4u-query.scw
PDB file : Tito_Scwrl_3N4U.pdb: