Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFARDALSTAVETACDPDPAVDTISTIEAGNN-HTYRVTLADGTDLFLKVGTRF--PDAFPAEPATMRRVRAETDLPVPRVHGTGTDPLEYPYAVYEYVPDCEAEWAG-DLS-----HEAAERLCREAGRHLCELHQITFPQFGRIGLDTDASADDTLVADAPDADALTVVDPTPFDDLLRQSLDRQVTELADSPFDTRRDSLEAFGTDLIDRSDFADVTPALVHGDYRLGNLCVDPSAEQITAAVLDWELPTALDPLWDAVMAQSLLTAGHRLDPDSRQTLRRAFWEAYGTSTADTPRRRCYELLARIRLARHLDTECRGLSEAARRARITDHHEAFDALLVDR
5UXD Chain:A ((4-253))-PEDLDALLDLAARHGLDLDGGTLRTEEIGLDFRVAFARAHDGGDWVLRLPRRPDVLERAAVEGRLLAMLAPHLDVAVPDWRIST-----SELIAYPLLPGSPGLTVAADGEVSWHVDMASTVYARSLGSVVAQLHAVDAEAAAATGIEVRSP----------------AQVRGAWRQDLARVGAE----F--EIAPALRERWEAWLADDG----CWPGHSVLTHGELYPAHTLVED---ERITAVLDWTTAAVGDPAKDLMFHQVSA----------PSAIFEVALQAY-AEGGG-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 992 -25351 -25.55 -105.19
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -25.55
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_5UXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxd-query.scw
PDB file : Tito_Scwrl_5UXD.pdb: