Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------------------------------------------------------------RPCRVDLYEFVHTKPGLTSWSWVHRFNGDARRASLFRAMGYLCSVDYNCKNFHCEKLTSWRW
1V8E Chain:A ((8-224))PLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRGREGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSALLPCLGVEAVHPHHALVTEEAVAGWRKR-GLFVVAWT--VN-EEGEARRLLALG----LDGLIGDR-PEVLLPLGG


General information:
TITO was launched using:
RESULT:

Template: 1V8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 174 -8570 -49.25 -161.69
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -49.25
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_1V8E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1v8e-query.scw
PDB file : Tito_Scwrl_1V8E.pdb: